Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000053a0
Genome
Corynebacterium glutamicum - NC_003450.3
TF
Zur [UniProtKB:Q8NNC4, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TAATGATAACGGTTATCATTT - [29970, 29990] 20055984 Experimental technique details Comparative genomics search (ECO:0005622) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 305

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... NCgl0027 NCgl0031 NCgl0032 NCgl0026 NCgl0028 NCgl0029 NCgl0030
Gene Locus tag Description
NCgl0027 NCgl0027 ABC transporter permease
NCgl0031 NCgl0031 ABC transporter ATPase
NCgl0032 NCgl0032 hypothetical protein
NCgl0026 NCgl0026 ABC transporter periplasmic component
NCgl0028 NCgl0028 ABC transporter ATPase
NCgl0029 NCgl0029 ABC transporter periplasmic component
NCgl0030 NCgl0030 ABC transporter permease