Transcription Factor Binding Site Information

Pectobacterium carotovorum - NC_018525.1
RdgB [UniProtKB:Q47588, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTTTTCTAAAACAGATTAAAAGCCGC + [1806365, 1806390] 18689515 Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 1134

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PCC21_015870 PCC21_015880 PCC21_015890 PCC21_015900 PCC21_015910
Gene Locus tag Description
PCC21_015870 PCC21_015870 hypothetical protein
PCC21_015880 PCC21_015880 hypothetical protein
PCC21_015890 PCC21_015890 bacteriophage tail sheath protein
PCC21_015900 PCC21_015900 major tail sheath protein
PCC21_015910 PCC21_015910 ferredoxin 2Fe-2S