Transcription Factor Binding Site Information

Escherichia coli - NC_000913.2
RelB [UniProtKB:P0C077, view regulon], [UniProtKB:P0C079, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGTAATTACAA - [1643909, 1643920] 19747491 Experimental technique details Beta-gal reporter assay - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Hydroxyl-radical footprinting (ECO:0005643) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 1045

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... relB relE hokD ydfV
Gene Locus tag Description
relB b1564 Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor
relE b1563 Qin prophage; toxin of the RelE-RelB toxin-antitoxin system
hokD b1562 Qin prophage; small toxic polypeptide
ydfV b1565 Qin prophage; predicted protein