Transcription Factor Binding Site Information

Escherichia coli - NC_000913.3
H-NS [UniProtKB:P0ACF8, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGTTAAGCT + [454388, 454397] 21708124 Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 566

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... bolA yajG ampG
Gene Locus tag Description
bolA b0435 stationary-phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC
yajG b0434 predicted lipoprotein
ampG b0433 muropeptide transporter