Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000af80
Genome
Streptococcus suis - NC_009442.1
TF
PerR [UniProtKB:A4VT39, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTATAATTATTATAA - [1603951, 1603965] 22646062 Experimental technique details EMSA (ECO:0001807) - Experimental technique details GFP Promoter Fusion (ECO:0005636) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 496

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... SSU05_1689 SSU05_1690 SSU05_1691 SSU05_1692 SSU05_1693
Gene Locus tag Description
SSU05_1689 SSU05_1689 Dpr
SSU05_1690 SSU05_1690 similar to MF3 gene in Streptococcus pyogenes MGAS10394
SSU05_1691 SSU05_1691 phosphotyrosine protein phosphatase
SSU05_1692 SSU05_1692 hypothetical protein
SSU05_1693 SSU05_1693 acyltransferase