Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000aec0
Genome
Caulobacter vibrioides - NC_002696.2
TF
IolR [UniProtKB:Q9A8Q6, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GGACCATATGTTCCA + [1444276, 1444290] 19096521 Experimental technique details Ad-hoc qualitative phenotype observation (ECO:0005674) - Experimental technique details Beta-gal reporter assay - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details Random mutagenesis (ECO:0005530) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 491

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CC_1298 CC_1297 CC_1299 CC_1300 CC_1301 CC_1302 CC_1303 CC_1304 CC_1305
Gene Locus tag Description
CC_1298 CC_1298 iolC protein
CC_1297 CC_1297 SIS domain-containing protein
CC_1299 CC_1299 iolD protein
CC_1300 CC_1300 hypothetical protein
CC_1301 CC_1301 iolB protein
CC_1302 CC_1302 methylmalonate-semialdehyde dehydrogenase
CC_1303 CC_1303 hypothetical protein
CC_1304 CC_1304 DNA-binding response regulator
CC_1305 CC_1305 sensor histidine kinase