Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000090c0
Genome
Vibrio vulnificus - NC_014965.1
TF
Fur [UniProtKB:P33117, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGACATTACTGTTCATTTA - [597080, 597098] 23716618 Experimental technique details Ad-hoc quantitative phenotype observation (ECO:0005676) - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Luciferase reporter assay (ECO:0005648) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Site directed mutagenesis (ECO:0005667) - Experimental technique details Visual sequence inspection (nan) - 432

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... VVMO6_00535 VVMO6_00534 VVMO6_00536 VVMO6_00537
Gene Locus tag Description
VVMO6_00535 VVMO6_00535 quorum-sensing regulator of virulence HapR
VVMO6_00534 VVMO6_00534 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex
VVMO6_00536 VVMO6_00536 hypoxanthine-guanine phosphoribosyltransferase
VVMO6_00537 VVMO6_00537 carbonic anhydrase