Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000089b0
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
LasR [UniProtKB:P25084, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CCGTCAGTATTGTTAG + [3483485, 3483500] 19682264 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - 422

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... xcpP xcpQ xcpR xcpS xcpT xcpU xcpV xcpW xcpX xcpY xcpZ PA3094.3 PA3094.2 PA3094.1 PA3106 metZ purF
Gene Locus tag Description
xcpP PA3104 secretion protein XcpP
xcpQ PA3105 general secretion pathway protein D
xcpR PA3103 general secretion pathway protein E
xcpS PA3102 general secretion pathway protein F
xcpT PA3101 general secretion pathway protein G
xcpU PA3100 general secretion pathway outer membrane protein H precursor
xcpV PA3099 general secretion pathway protein I
xcpW PA3098 general secretion pathway protein J
xcpX PA3097 general secretion pathway protein K
xcpY PA3096 general secretion pathway protein L
xcpZ PA3095 general secretion pathway protein M
PA3094.3 PA3094.3 tRNA
PA3094.2 PA3094.2 tRNA
PA3094.1 PA3094.1 tRNA
PA3106 PA3106 oxidoreductase
metZ PA3107 O-succinylhomoserine sulfhydrylase
purF PA3108 amidophosphoribosyltransferase