Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00008980
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
LasR [UniProtKB:P25084, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CCTGGAGACCAGGCTG + [4604597, 4604612] 19682264 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - 422

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... bphP bphO PA4115 PA4118 aph PA4120
Gene Locus tag Description
bphP PA4117 phytochrome BphP
bphO PA4116 heme oxygenase, BphO
PA4115 PA4115 hypothetical protein
PA4118 PA4118 hypothetical protein
aph PA4119 aminoglycoside 3-N-acetyltransferase
PA4120 PA4120 transcriptional regulator