Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00008970
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
LasR [UniProtKB:P25084, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CCATCTGACATGTAGG + [27577, 27592] 19682264 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - 422

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... plcB PA0027 PA0028 aroE hemF PA0029 PA0030 betC PA0032
Gene Locus tag Description
plcB PA0026 phospholipase C, PlcB
PA0027 PA0027 hypothetical protein
PA0028 PA0028 hypothetical protein
aroE PA0025 shikimate 5-dehydrogenase
hemF PA0024 coproporphyrinogen III oxidase
PA0029 PA0029 sulfate transporter
PA0030 PA0030 hypothetical protein
betC PA0031 choline sulfatase
PA0032 PA0032 transcriptional regulator