Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000088b0
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
LasR [UniProtKB:P25084, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GCGTCAGATTTCCTCG + [2453398, 2453413] 19682264 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - 421

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... pslL pslK pslJ pslI pslH pslG pslF pslE pslD pslC pslB pslA PA2229 PA2230
Gene Locus tag Description
pslL PA2242 hypothetical protein
pslK PA2241 protein PslL
pslJ PA2240 protein PslJ
pslI PA2239 protein PslI
pslH PA2238 protein PslH
pslG PA2237 protein PslG
pslF PA2236 protein PslF
pslE PA2235 protein PslE
pslD PA2234 protein PslD
pslC PA2233 protein PslC
pslB PA2232 protein PslB
pslA PA2231 protein PslA
PA2229 PA2229 hypothetical protein
PA2230 PA2230 hypothetical protein