Site information for: Fur in species Actinobacillus pleuropneumoniae; genome accession: NC

Transcription Factor Binding Site Information

dbxref: CollecTF:EXPSITE_00004d60
Genome: Actinobacillus pleuropneumoniae - NC_010939.1
TF: Fur [UniProtKB:B3H1Z1, view regulon]

Supporting Evidence

Binding site	Location	Publication	Experimental techniques used	Curation
GATAATGATTTTCATTAAC	- [1823334, 1823352]	15908404	Experimental technique details Visual sequence inspection (nan) Visual sequence inspection - nan Visual inspection of promoter region to identify putative binding sites based on previous knowledge - Experimental technique details Western blot (quantitative) expression analysis (ECO:0000279) Western blot (quantitative) expression analysis - ECO:0000279 A Western blot (also frequently called immunoblot) is a gel-based technique used to determine the presence of specific proteins in a sample by means of separation (through gel electrophoresis) and detection (using a protein-specific antibody). Less frequent than the equivalent RNA Northern blot, it is typically used in TF-binding site analysis to validate differential regulation of target genes. -	259

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

Gene	Locus tag	Description
APP7_1631	APP7_1631	biopolymer transport ExbD protein
APP7_1629	APP7_1629	transferrin-binding protein 1 Tbp1
APP7_1633	APP7_1633	hypothetical protein
APP7_1632	APP7_1632	biopolymer transport ExbB protein
APP7_1630	APP7_1630	transferrin-binding protein
APP7_1634	APP7_1634	hypothetical protein