Curation Information

Publication

LexA, a transcription regulator binding in the promoter region of the bidirectional hydrogenase in the cyanobacterium Synechocystis sp. PCC 6803.;Oliveira P, Lindblad P;FEMS microbiology letters 2005 Oct 1; 251(1):59-66 [16102913]

TF

LexA [P73722, view regulon]

Reported TF sp.

Synechocystis sp. PCC 6803

Reported site sp.

Synechocystis sp. PCC 6803

Created by

Erill Lab

Curation notes

-

Experimental Process

hoxE determined to form operon via RT-PCR. LexA identified as binding via affinity assays and mass spec. Validation of binding with EMSA with multiple sized fragments.

Transcription Factor Binding Sites

• Sites reported in the paper
• Sites matched in the genome

Gene Regulation

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.