Curation Information

Publication

Competitive and cooperative effects in quorum-sensing-regulated galactoglucan biosynthesis in Sinorhizobium meliloti.;McIntosh M, Krol E, Becker A;Journal of bacteriology 2008 Aug; 190(15):5308-17 [18515420]

TF

ExpR [Q92L12, view regulon]

Reported TF sp.

Sinorhizobium meliloti 1021

Reported site sp.

Sinorhizobium meliloti 1021

Created by

Erill Lab

Curation notes

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Experimental Process

Use of EMSA and beta-gal to simultaneously assess the effects of single-nucleotide mutations on the sinI promoter ExpR bidning site.

Transcription Factor Binding Sites

• Sites reported in the paper
• Sites matched in the genome

Gene Regulation

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.