Curation Information

Publication

Analysis of LuxR regulon gene expression during quorum sensing in Vibrio fischeri.;Qin N, Callahan SM, Dunlap PV, Stevens AM;Journal of bacteriology 2007 Jun; 189(11):4127-34 [17400743]

TF

LuxR [B5EV73, view regulon]

Reported TF sp.

Vibrio Fischeri MJ-1

Reported site sp.

Vibrio Fischeri MJ-1

Created by

Elliot White

Curation notes

Reported sites do not appear in genome of MJ-11, or the other sequenced strain: ES114

Experimental Process

Researchers used LacZ fusions (in E. Coli) to determine the regulatory impact of LuxR on the putative lux boxes. They then ran EMSA's with those that showed a change in regulation.

Transcription Factor Binding Sites

• Sites reported in the paper
• Sites matched in the genome

Gene Regulation

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.