Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0002dd60
Genome
Lactococcus lactis - NC_002662.1
TF
CopR [UniProtKB:Q9CHA6, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GTTTACAATTGTAAAC + [79266, 79281] 17993525 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details MALDI-TOF Mass Spectrometry (ECO:0005527) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 1108

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... yaiB yaiA yahD L200005
Gene Locus tag Description
yaiB L81206 hypothetical protein
yaiA L80191 hypothetical protein
yahD L79507 hypothetical protein
L200005 L200005 hypothetical protein