Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000231a0
Genome
Aliivibrio fischeri - NC_006841.2
TF
SypG [UniProtKB:Q5DYQ0, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTCTCAATTTGCAAT - [1149457, 1149471] 24097942 Experimental technique details Ad-hoc qualitative phenotype observation (ECO:0005674) - 842

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... VF_A1019 VF_A1018 sypA sypB sypC sypD sypE sypF sypG sypH
Gene Locus tag Description
VF_A1019 VF_A1019 cytoplasmic protein
VF_A1018 VF_A1018 lipoprotein
sypA VF_A1020 sulphate transporter, anti-sigma factor antagonist
sypB VF_A1021 hypothetical protein
sypC VF_A1022 polysaccharide export periplasmic protein
sypD VF_A1023 chromosome partitioning ATPase
sypE VF_A1024 two-component response regulator, sigma factor PP2C-like phosphatase
sypF VF_A1025 two-component hybrid sensor histidine kinase
sypG VF_A1026 Fis family transcriptional regulator
sypH VF_A1027 glycosyl transferases group 1