Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000220e0
Genome
Pseudomonas putida - NC_002947.3
TF
IHF [UniProtKB:P0A126, view regulon], [UniProtKB:P0A128, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TACAAGATGATG + [947606, 947617] 22510163 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details DNA-array expression analysis (ECO:0005525) - 790

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... hmpA PP_0807 dsbB cyoups1 cyoups2 cyoA cyoB cyoC cyoD cyoE-2
Gene Locus tag Description
hmpA PP_0808 nitric oxide dioxygenase
PP_0807 PP_0807 anaerobic nitric oxide reductase transcriptional regulator
dsbB PP_0809 disulfide bond formation protein B
cyoups1 PP_0810 cyoups1 protein
cyoups2 PP_0811 cyoups2 protein
cyoA PP_0812 ubiquinol oxidase subunit II
cyoB PP_0813 cytochrome o ubiquinol oxidase subunit I
cyoC PP_0814 cytochrome o ubiquinol oxidase subunit III
cyoD PP_0815 cytochrome o ubiquinol oxidase, protein CyoD
cyoE-2 PP_0816 protoheme IX farnesyltransferase