Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000220d0
Genome
Pseudomonas putida - NC_002947.3
TF
IHF [UniProtKB:P0A126, view regulon], [UniProtKB:P0A128, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TACAACTCGATG + [458943, 458954] 22510163 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details DNA-array expression analysis (ECO:0005525) - 790

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... pqqC pqqD pqqB pqqE PP_0375
Gene Locus tag Description
pqqC PP_0378 pyrroloquinoline quinone biosynthesis protein PqqC
pqqD PP_0377 pyrroloquinoline quinone biosynthesis protein PqqD
pqqB PP_0379 pyrroloquinoline quinone biosynthesis protein PqqB
pqqE PP_0376 pyrroloquinoline quinone biosynthesis protein PqqE
PP_0375 PP_0375 prolyl oligopeptidase