Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00021a00
Genome
Pseudomonas putida - NC_002947.3
TF
OxyR [UniProtKB:Q88C74, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATTGTTTATTTCTATTGATGTAAGTCATGTAATGAAT + [564405, 564441] 17107553 Experimental technique details Ad-hoc quantitative phenotype observation (ECO:0005676) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 740

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... katA
Gene Locus tag Description
katA PP_0481 catalase