Curation Information

Purification of the LysR family regulator, ClcR, and its interaction with the Pseudomonas putida clcABD chlorocatechol operon promoter.;Coco WM, Parsek MR, Chakrabarty AM;Journal of bacteriology 1994 Sep; 176(17):5530-3 [8071232]
ClcR [A0A024HKB0, view regulon]
Reported TF sp.
Pseudomonas putida plasmid pAC27
Reported site sp.
Pseudomonas putida plasmid pAC27
Created by
Matthew Coveyou
Curation notes

Experimental Process

EMSA was used to determine the purity of isolated clcR. DNase I protection identified the binding region on the clcABD promoter.

Transcription Factor Binding Sites

Gene Regulation

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

Site sequence Regulated genes Gene diagram Experimental techniques TF function TF type