Curation Information

GsmR, a response regulator with an HD-related output domain in Xanthomonas campestris, is positively controlled by Clp and is involved in the expression of genes responsible for flagellum synthesis.;Liu YF, Liao CT, Song WL, Hsu PC, Du SC, Lo HH, Hsiao YM;The FEBS journal 2013 Jan; 280(1):199-213 [23137357]
Clp [Q4UZF6, view regulon]
Reported TF sp.
Xanthomonas campestris pv. campestris str.17
Reported site sp.
Xanthomonas campestris pv. campestris str.17
Created by
Dinara Sagitova
Curation notes

Experimental Process

A putative Clp binding site with seven of 10 bases matching the consensus was identified in the gsmR promoter. Gel retardation assay confirmed that Clp binds to the gsmR upstream region. gsmR-lacZ reporter assay showed that the expression of gsmR requires Clp and is subject to catabolite repression.

Transcription Factor Binding Sites


Gene Regulation

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

Site sequence Regulated genes Gene diagram Experimental techniques TF function TF type
... ... XCC3315
Experimental technique details Beta-gal reporter assay - Experimental technique details EMSA (ECO:0001807) - activator not specified