Curation Information

Publication

Positive regulation of the Vibrio cholerae porin OmpT by iron and fur.;Craig SA, Carpenter CD, Mey AR, Wyckoff EE, Payne SM;Journal of bacteriology 2011 Dec; 193(23):6505-11 [21965571]

TF

Fur [A5F6G4, view regulon]

Reported TF sp.

Vibrio cholerae O395

Reported site sp.

Vibrio cholerae O395

Created by

Erill Lab

Curation notes

-

Experimental Process

RNA dot blot assay confirmed Fur-dependent activation of the ompT expression. EMSA showed binding of Fur to the ompT promoter region. Site-directed mutagenesis showed the binding is specific.

Transcription Factor Binding Sites

• Sites reported in the paper
• Sites matched in the genome

Gene Regulation

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.