Differentially expressed genes identified by DNA-array. Putative sites identified by MSA with known (algD) promoter sites. Function of site shown by restoration of twitching motility with motility plasmid on a algR mutant.
Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.
|Site sequence||Regulated genes||Gene diagram||Experimental techniques||TF function||TF type|
|CCGTCGGTC||pilY1, pilX, pilW, pilV, fimU, fimT, pilY2,||
|CCGTTGGCC||fimT, fimU, pilV, pilW, pilX, pilY1, pilY2,||
|CCGTTTGGC||fimT, fimU, pilV, pilW, pilX, pilY1, pilY2,||