Curation Information

The SOS response controls integron recombination.;Guerin E, Cambray G, Sanchez-Alberola N, Campoy S, Erill I, Da Re S, Gonzalez-Zorn B, Barbé J, Ploy MC, Mazel D;Science (New York, N.Y.) 2009 May 22; 324(5930):1034 [19460999]
LexA [Q9KVP9, view regulon]
Reported TF sp.
Vibrio cholerae O1 biovar El Tor str. N16961
Reported site sp.
Vibrio cholerae O1 biovar El Tor str. N16961
Created by
Elliot White
Curation notes

Experimental Process

The researchers used a PSSM search to identify potential sites, then confirmed binding with EMSA's and regulation with B-Gal assays

Transcription Factor Binding Sites


Gene Regulation

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

Site sequence Regulated genes Gene diagram Experimental techniques TF function TF type
... ... VCA0291 VCA0292
Experimental technique details Beta-gal reporter assay - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - repressor dimer