Computational search of HrpL binding sites was validated by DNA array analysis or Northern blot analysis using DC3000 (WT) and hrpL (L–) mutants in hrp-inducing medium.
Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.
|Site sequence||Regulated genes||Gene diagram||Experimental techniques||TF function||TF type|