Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0002db60
Genome
Escherichia coli - NC_000913.2
TF
Lrp [UniProtKB:P0ACJ0, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CGGAATTTTATGCTG + [1236605, 1236619] 10216857 Experimental technique details Beta-gal reporter assay - Experimental technique details Consensus search (ECO:0005624) - Experimental technique details Hydroxyl-radical footprinting (ECO:0005643) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 1101

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... dadA dadX ycgB
Gene Locus tag Description
dadA b1189 D-amino acid dehydrogenase
dadX b1190 alanine racemase 2, PLP-binding
ycgB b1188 conserved protein