Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0002d010
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
OxyR [UniProtKB:Q9HTL4, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATAGGGAGAATCTAT + [1048126, 1048140] 22275523 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 1053

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... aspS PA0962 pmpR ruvC ruvA ruvB PA0968 tolQ tolR tolA tolB oprL PA0974 PA0975 PA0976 PA0976.1
Gene Locus tag Description
aspS PA0963 aspartyl-tRNA synthetase
PA0962 PA0962 dna-binding stress protein
pmpR PA0964 hypothetical protein
ruvC PA0965 Holliday junction resolvase
ruvA PA0966 Holliday junction DNA helicase RuvA
ruvB PA0967 Holliday junction DNA helicase RuvB
PA0968 PA0968 hypothetical protein
tolQ PA0969 TolQ protein
tolR PA0970 TolR protein
tolA PA0971 TolA protein
tolB PA0972 translocation protein TolB
oprL PA0973 peptidoglycan associated lipoprotein OprL precursor
PA0974 PA0974 hypothetical protein
PA0975 PA0975 radical activating enzyme
PA0976 PA0976 hypothetical protein
PA0976.1 PA0976.1 tRNA