Transcription Factor Binding Site Information

Caulobacter vibrioides - NC_002696.2
XylR [UniProtKB:Q9A3Y5, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGTTAGCGCTACCA - [919856, 919869] 17933895 Experimental technique details Beta-gal reporter assay - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Random mutagenesis (ECO:0005530) - 1022

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CC_0823 CC_0822 CC_0821 CC_0820 CC_0819 CC_0818 CC_0817 CC_0816 CC_0824
Gene Locus tag Description
CC_0823 CC_0823 hypothetical protein
CC_0822 CC_0822 aldehyde dehydrogenase
CC_0821 CC_0821 short chain dehydrogenase/reductase family oxidoreductase
CC_0820 CC_0820 Smp-30/Cgr1 family protein
CC_0819 CC_0819 dihydroxy-acid dehydratase
CC_0818 CC_0818 hypothetical protein
CC_0817 CC_0817 hypothetical protein
CC_0816 CC_0816 acetyltransferase
CC_0824 CC_0824 hypothetical protein