Transcription Factor Binding Site Information

Shewanella piezotolerans - NC_011566.1
Fur [UniProtKB:B8CQZ2, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AGATAAGAATAATTATCATTT + [4672601, 4672621] 24124499 Experimental technique details EMSA (ECO:0001807) - Experimental technique details qPCR [quantitative real-time] (ECO:0005660) - Experimental technique details RNA-Seq (ECO:0005664) - Experimental technique details Visual sequence inspection (nan) - 1018

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... swp_4456 swp_4457 swp_4458
Gene Locus tag Description
swp_4456 swp_4456 NapD
swp_4457 swp_4457 Twin-arginine translocation pathway signal:Periplasmic nitrate reductase, large subunit
swp_4458 swp_4458 Nitrate reductase cytochrome c-type subunit (NapB)