Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0002bec0
Genome
Escherichia coli - NC_007779.1
TF
CsgD [UniProtKB:P52106, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AGAAGTGCCAGACT + [3800300, 3800313] 21421764 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details Multiple sequence alignment (MSA) (ECO:0005556) - 994

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... nlpA yicS
Gene Locus tag Description
nlpA Y75_p3514 cytoplasmic membrane lipoprotein-28
yicS Y75_p3513 hypothetical protein