Transcription Factor Binding Site Information

Shewanella oneidensis - NC_004347.2
NagR [UniProtKB:Q8EBJ8, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTTGACAACGTTGTCTTT + [1112399, 1112416] 21810205 Experimental technique details Comparative genomics search (ECO:0005622) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 981

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... SO_1071 gbpA
Gene Locus tag Description
SO_1071 SO_1071 membrane protein of unknown function UPF0016
gbpA SO_1072 N-acetylglucosamine-binding protein A GbpA