Transcription Factor Binding Site Information

Yersinia pestis - NC_005810.1
OmpR [UniProtKB:Q7CFX0, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AAAACATTTTATTACATTTA + [3259504, 3259523] 21345178 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 971

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... YP_2926 bglX2 YP_2933 malG5 malF5 ugpB4 purR10 YP_2928 YP_2927 yapF YP_2925
Gene Locus tag Description
YP_2926 YP_2926 hypothetical protein
bglX2 YP_2934 glycosyl hydrolase
YP_2933 YP_2933 hypothetical protein
malG5 YP_2932 permease
malF5 YP_2931 permease
ugpB4 YP_2930 sugar binding protein
purR10 YP_2929 LacI-family regulatory protein
YP_2928 YP_2928 hypothetical protein
YP_2927 YP_2927 transporter ATP-binding protein
yapF YP_2924 autotransporter protein
YP_2925 YP_2925 hypothetical protein