Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00029c60
Genome
Vibrio campbellii - NC_009784.1
TF
LuxO [UniProtKB:A7MVC2, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGCAATATGCAT - [1081180, 1081192] 17234887 Experimental technique details Ad-hoc quantitative phenotype observation (ECO:0005676) - Experimental technique details Consensus search (ECO:0005624) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 942

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... VIBHAR_05886 VIBHAR_05885 VIBHAR_05884 VIBHAR_05883 VIBHAR_05882
Gene Locus tag Description
VIBHAR_05886 VIBHAR_05886 miscRNA
VIBHAR_05885 VIBHAR_05885 hypothetical protein
VIBHAR_05884 VIBHAR_05884 hypothetical protein
VIBHAR_05883 VIBHAR_05883 hypothetical protein
VIBHAR_05882 VIBHAR_05882 hypothetical protein