Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00029bb0
Genome
Enterococcus faecalis - NC_004668.1
TF
CcpA [UniProtKB:H7C6V6, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGAAAGCGTTATCCA - [3211608, 3211622] 21989394 Experimental technique details Beta-gal reporter assay - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Site directed mutagenesis (ECO:0005667) - Experimental technique details Visual sequence inspection (nan) - Experimental technique details Western blot (quantitative) expression analysis (ECO:0000279) - 937

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... EF3326 EF3325 EF3324 EF3323 citC citD citE citF citX EF3317 EF3316 EF3315 EF3327 EF3328
Gene Locus tag Description
EF3326 EF3326 hypothetical protein
EF3325 EF3325 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
EF3324 EF3324 sodium ion-translocating decarboxylase subunit beta
EF3323 EF3323 hypothetical protein
citC EF3322 citrate lyase ligase
citD EF3321 citrate lyase subunit gamma
citE EF3320 citrate lyase subunit beta
citF EF3319 citrate lyase subunit alpha
citX EF3318 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
EF3317 EF3317 oxaloacetate decarboxylase
EF3316 EF3316 malic enzyme family protein
EF3315 EF3315 triphosphoribosyl-dephospho-CoA synthase
EF3327 EF3327 citrate transporter
EF3328 EF3328 GntR family transcriptional regulator