Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000299a0
Genome
Peptoclostridium difficile - NC_009089.1
TF
CcpA [UniProtKB:Q18AR8, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AAGAAAACGATTTTGT + [1781920, 1781935] 22989714 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - 936

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CD630_15360 sseA aspB
Gene Locus tag Description
CD630_15360 CD630_15360 ferredoxin-NADP(+) reductase subunit alpha
sseA CD630_15350 3-mercaptopyruvate sulfurtransferase
aspB CD630_15370 oxidoreductase