Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000298e0
Genome
Peptoclostridium difficile - NC_009089.1
TF
CcpA [UniProtKB:Q18AR8, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATGATAACATTTTCTT + [821478, 821493] 22989714 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 936

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CD630_06790 CD630_06800 CD630_06810 CD630_06820 CD630_06830
Gene Locus tag Description
CD630_06790 CD630_06790 hypothetical protein
CD630_06800 CD630_06800 hypothetical protein
CD630_06810 CD630_06810 transporter, Major Facilitator Superfamily (MFS)
CD630_06820 CD630_06820 sodium:solute symporter
CD630_06830 CD630_06830 LacI family transcriptional regulator