Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000298b0
Genome
Peptoclostridium difficile - NC_009089.1
TF
CcpA [UniProtKB:Q18AR8, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AGGAAAACGTATTATA - [635641, 635656] 22989714 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 936

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CD630_05300 CD630_05290 CD630_05280 CD630_05310
Gene Locus tag Description
CD630_05300 CD630_05300 membrane protein
CD630_05290 CD630_05290 membrane protein
CD630_05280 CD630_05280 amidohydrolase
CD630_05310 CD630_05310 DeoR family transcriptional regulator