Transcription Factor Binding Site Information

Vibrio cholerae - NC_012668.1
HapR [UniProtKB:A0A0H3Q915, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CAAATAACAAAATAATCATTAG + [7094, 7115] 15838027 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Luciferase reporter assay (ECO:0005648) - Experimental technique details RACE PCR (ECO:0005661) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 918

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... VCD_001025 VCD_001024
Gene Locus tag Description
VCD_001025 VCD_001025 quorum-sensing regulator of virulence HapR
VCD_001024 VCD_001024 hypoxanthine-guanine phosphoribosyltransferase