Transcription Factor Binding Site Information

Escherichia coli - NC_000913.3
ArcA [UniProtKB:P0A9Q1, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGTAACAAACGTGTTAAAAT + [1319954, 1319974] 24146625 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - 871

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... trpD trpC trpB trpA
Gene Locus tag Description
trpD b1263 fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase
trpC b1262 fused indole-3-glycerolphosphate synthetase/N-(5-phosphoribosyl)anthranilate isomerase
trpB b1261 tryptophan synthase, beta subunit
trpA b1260 tryptophan synthase, alpha subunit