Transcription Factor Binding Site Information

Escherichia coli - NC_000913.3
ArcA [UniProtKB:P0A9Q1, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGTTAAATTATTGTGCATTT + [1300709, 1300729] 24146625 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - 871

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... oppA oppB oppC oppD oppF
Gene Locus tag Description
oppA b1243 oligopeptide transporter subunit
oppB b1244 oligopeptide transporter subunit
oppC b1245 oligopeptide transporter subunit
oppD b1246 oligopeptide transporter subunit
oppF b1247 oligopeptide transporter subunit