Transcription Factor Binding Site Information

Escherichia coli - NC_000913.3
ArcA [UniProtKB:P0A9Q1, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CTGTTAACGCAATGTTGTAAA + [1223200, 1223220] 24146625 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - 871

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ymgJ ymgI ymgG ymgD ycgI
Gene Locus tag Description
ymgJ b4594 hypothetical protein
ymgI b4593 hypothetical protein
ymgG b1172 conserved protein, UPF0757 family
ymgD b1171 predicted protein
ycgI b4521 pseudo