Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00023f50
Genome
Bacillus subtilis - NC_000964.3
TF
CcpA [UniProtKB:P25144, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGAAAGCGTTTTCC + [758065, 758078] 22900538 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 854

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... yesL yesM yesN yesO yesP yesQ yesR yesS rhgT yesU yesV yesW yesX
Gene Locus tag Description
yesL BSU06940 permease
yesM BSU06950 two-component sensor histidine kinase YesN
yesN BSU06960 two-component response regulator YesM
yesO BSU06970 pectin degradation byproducts-binding lipoprotein
yesP BSU06980 rhamnogalacturonan permease
yesQ BSU06990 rhamnogalacturonan permease
yesR BSU07000 rhamnogalacturonan hydrolase
yesS BSU07010 AraC family transcriptional regulator
rhgT BSU07020 rhamnogalacturonan acetylesterase
yesU BSU07030 hypothetical protein
yesV BSU07040 hypothetical protein
yesW BSU07050 polysaccharide lyase; lipoprotein
yesX BSU07060 polysaccharide lyase