Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00023ca0
Genome
Bacillus subtilis - NC_000964.3
TF
CcpA [UniProtKB:P25144, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGAAAGCGTTTAAT - [4084475, 4084488] 22900538 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 854

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... iolR mmsA iolB iolC iolD iolE iolF iolG iolH iolI iolJ yxdJ yxdK yxdL yxdM yxeA iolS
Gene Locus tag Description
iolR BSU39770 DeoR family transcriptional regulator
mmsA BSU39760 methylmalonate-semialdehyde dehydrogenase
iolB BSU39750 5-deoxy-D-glucuronic acid isomerase
iolC BSU39740 2-deoxy-5-keto-D-gluconic acid kinase
iolD BSU39730 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
iolE BSU39720 2-keto-myo-inositol dehydratase
iolF BSU39710 inositol transport protein
iolG BSU39700 myo-inositol 2-dehydrogenase
iolH BSU39690 sugar-phosphate epimerase/isomerase
iolI BSU39680 sugar-phosphate epimerase/isomerase
iolJ BSU39670 2-deoxy-5-keto-D-gluconic acid 6-phosphate aldolase
yxdJ BSU39660 two-component response regulator YxdK
yxdK BSU39650 two-component sensor histidine kinase YxdJ
yxdL BSU39640 cationic peptides ABC transporter ATP-binding protein
yxdM BSU39630 cationic peptides ABC transporter permease
yxeA BSU39620 hypothetical protein
iolS BSU39780 aldo/keto reductase