Transcription Factor Binding Site Information

Streptococcus suis - NC_012925.1
CcpA [UniProtKB:G5L2G2, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTTTTTCAATGATTTTCTGAT - [1830186, 1830206] 24673665 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - 852

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... rpmH SSU1802 SSU1801 SSU1800 SSU1799 SSU1798 mutX SSU1796 SSU1795 SSU1794 ksgA
Gene Locus tag Description
rpmH SSU1803 50S ribosomal protein L34
SSU1802 SSU1802 TatD related DNase
SSU1801 SSU1801 DNA primase
SSU1800 SSU1800 hypothetical protein
SSU1799 SSU1799 hypothetical protein
SSU1798 SSU1798 plasmid stabilisation system protein
mutX SSU1797 mutator protein
SSU1796 SSU1796 toxin-antitoxin system, antitoxin protein
SSU1795 SSU1795 toxin-antitoxin system, toxin protein
SSU1794 SSU1794 hypothetical protein
ksgA SSU1793 dimethyladenosine transferase