Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00023190
Genome
Aliivibrio fischeri - NC_006841.2
TF
SypG [UniProtKB:Q5DYQ0, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTCTCAATTTGAGAA + [1168989, 1169003] 24097942 Experimental technique details Ad-hoc qualitative phenotype observation (ECO:0005674) - Experimental technique details Beta-gal reporter assay - Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details Consensus search (ECO:0005624) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 842

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... sypP sypQ sypR
Gene Locus tag Description
sypP VF_A1035 glycosyltransferase
sypQ VF_A1036 glycosyltransferase
sypR VF_A1037 sugar transferase