Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00023040
Genome
Saccharopolyspora erythraea - NC_009142.1
TF
GlnR [UniProtKB:A4FQD5, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTAACAGTCAAGATAC + [6455263, 6455278] 24931311 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 832

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... gltB SACE_5741 SACE_5743 SACE_5744 SACE_5745
Gene Locus tag Description
gltB SACE_5742 glutamate synthase(NADPH) large subunit
SACE_5741 SACE_5741 glutamate synthase, NADH/NADPH, small subunit 1
SACE_5743 SACE_5743 iron ABC transporter substrate-binding protein
SACE_5744 SACE_5744 ABC-type transporter, permease component
SACE_5745 SACE_5745 iron ABC transporter ATP-binding protein