Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00022980
Genome
Salmonella enterica - NC_003197.1
TF
RpoN [UniProtKB:P26979, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGGCCTGCTATTTGCCCT + [4128295, 4128312] 24007446 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details PSSM site search (ECO:0005659) - 822

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... wzzE wecB wecC rffG rffH wecD wecE wzxE STM3927 wecF wecG
Gene Locus tag Description
wzzE STM3919 lipopolysaccharide biosynthesis protein WzzE
wecB STM3920 UDP-N-acetyl glucosamine-2-epimerase
wecC STM3921 UDP-N-acetyl-D-mannosamine dehydrogenase
rffG STM3922 dTDP-glucose 4,6-dehydratase
rffH STM3923 glucose-1-phosphate thymidylyltransferase
wecD STM3924 TDP-fucosamine acetyltransferase
wecE STM3925 TDP-4-oxo-6-deoxy-D-glucose transaminase
wzxE STM3926 O-antigen translocase
STM3927 STM3927 4-alpha-L-fucosyltransferase
wecF STM3928 common antigen polymerase
wecG STM3929 UDP-N-acetyl-D-mannosaminuronic acid transferase