Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00022680
Genome
Salmonella enterica - NC_003197.1
TF
RpoN [UniProtKB:P26979, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGGCATGGAAAATGCTTA - [2999622, 2999639] 24007446 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 822

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... 3000000 hycA hycB hycC hycD hycE hycF hycG hycH hycI STM2844 hypA hypB hypC hypD hypE
Gene Locus tag Description
hycA STM2853 formate hydrogenlyase regulatory protein HycA
hycB STM2852 hydrogenase-3 iron-sulfur subunit
hycC STM2851 formate hydrogenlyase subunit 3
hycD STM2850 hydrogenase 3 membrane subunit
hycE STM2849 hydrogenase 3 large subunit
hycF STM2848 formate hydrogenlyase complex iron-sulfur subunit
hycG STM2847 hydrogenase
hycH STM2846 hydrogenase 3 large subunit processing protein
hycI STM2845 hydrogenase 3 maturation protease
STM2844 STM2844 hypothetical protein
hypA STM2854 hydrogenase nickel incorporation protein
hypB STM2855 hydrogenase nickel incorporation protein HypB
hypC STM2856 hydrogenase assembly chaperone
hypD STM2857 hydrogenase formation protein
hypE STM2858 hydrogenase formation protein