Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00022580
Genome
Salmonella enterica - NC_003197.1
TF
RpoN [UniProtKB:P26979, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGGCATAGCCTTTGCTTT + [417914, 417931] 24007446 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 822

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... prpB prpR prpC prpD prpE
Gene Locus tag Description
prpB STM0368 2-methylisocitrate lyase
prpR STM0367 prp operon regulator
prpC STM0369 methylcitrate synthase
prpD STM0370 2-methylcitrate dehydratase
prpE STM0371 propionyl-CoA synthetase